Package: eider 1.0.0

Camila Rangel Smith

eider: Declarative Feature Extraction from Tabular Data Records

Extract features from tabular data in a declarative fashion, with a focus on processing medical records. Features are specified as JSON and are independently processed before being joined. Input data can be provided as CSV files or as data frames. This setup ensures that data is transformed in a modular and reproducible manner, and allows the same pipeline to be easily applied to new data.

Authors:Catalina Vallejos [ctb], Louis Aslett [ctb], Simon Rogers [ctb], Camila Rangel Smith [cre, ctb], Helen Duncan Little [aut], Jonathan Yong [aut], The Alan Turing Institute [cph, fnd]

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eider.pdf |eider.html✨
eider/json (API)
NEWS

# Install 'eider' in R:
install.packages('eider', repos = c('https://alan-turing-institute.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/alan-turing-institute/eider/issues

On CRAN:

Conda:

hut23hut23-1515

6.26 score 3 stars 10 scripts 595 downloads 2 exports 25 dependencies

Last updated 10 months agofrom:1eeab80afd. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 10 2025
R-4.5-winOKMar 10 2025
R-4.5-macOKMar 10 2025
R-4.5-linuxOKMar 10 2025
R-4.4-winOKMar 10 2025
R-4.4-macOKMar 10 2025
R-4.4-linuxOKMar 10 2025
R-4.3-winOKMar 10 2025
R-4.3-macOKMar 10 2025

Exports:eider_examplerun_pipeline

Dependencies:clicpp11dplyrfansifsgenericsgluejsonlitelifecycleloggerlubridatemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyselecttimechangeutf8vctrswithr

An overview of features

Rendered fromfeatures.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-05-03
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Combination features

Rendered fromcombination.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-04-02
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Examples: A&E data

Rendered fromexamples_ae.Rmdusingknitr::rmarkdownon Mar 10 2025.

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Examples: LTC data

Rendered fromexamples_ltc.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-03-31
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Examples: PIS data

Rendered fromexamples_pis.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-04-01
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Examples: SMR04 data

Rendered fromexamples_smr04.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-04-02
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Filtering

Rendered fromfiltering.Rmdusingknitr::rmarkdownon Mar 10 2025.

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Introduction to eider

Rendered fromeider.Rmdusingknitr::rmarkdownon Mar 10 2025.

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Logging and errors

Rendered fromlogging.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-03-29
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Preprocessing

Rendered frompreprocessing.Rmdusingknitr::rmarkdownon Mar 10 2025.

Last update: 2024-04-01
Started: 2024-03-25